Publications

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  1. Pande K, Hutchison CD, Groenhof G, Aquila A, Robinson JS, Tenboer J, Basu S, Boutet S, DePonte DP, Liang M, White TA, Zatsepin NA, Yefanov O, Morozov D, Oberthuer D, Gati C, Subramanian G, James D, Zhao Y, Koralek J, Brayshaw J, Kupitz C, Conrad C, Roy-Chowdhury S, Coe JD, Metz M, Xavier PL, Grant TD, Koglin JE, Ketawala G, Fromme R, Šrajer V, Henning R, Spence JC, Ourmazd A, Schwander P, Weierstall U, Frank M, Fromme P, Barty A, Chapman HN, Moffat K, van Thor JJ, Schmidt M. Femtosecond structural dynamics drives the trans/cis isomerization in photoactive yellow protein. Science. 2016 May 6;352(6286):725-9. doi: 10.1126/science.aad5081. Epub 2016 May 5.
  2. Martin-Garcia JM, Conrad CE, Coe J, Roy-Chowdhury S, Fromme P. Review: Serial femtosecond crystallography: A revolution in structural biology. Arch Biochem Biophys. 2016 Apr 30. pii: S0003-9861(16)30072-8. doi: 10.1016/j.abb.2016.03.036. [Epub ahead of print]
  3. Zhou XE, Gao X, Barty A, Kang Y, He Y, Liu W, Ishchenko A, White TA, Yefanov O, Han GW, Xu Q, de Waal PW, Suino-Powell KM, Boutet S, Williams GJ, Wang M, Li D, Caffrey M, Chapman HN, Spence JC, Fromme P, Weierstall U, Stevens RC, Cherezov V, Melcher K, Xu HE. X-ray laser diffraction for structure determination of the rhodopsin-arrestin complex. Sci Data. 2016 Apr 12;3:160021. doi: 10.1038/sdata.2016.21.
  4. Kessans SA, Linhart MD, Meador LR, Kilbourne J, Hogue BG, Fromme P, Matoba N, Mor TS. Immunological Characterization of Plant-Based HIV-1 Gag/Dgp41 Virus-Like Particles.PLoS One. 2016 Mar 17;11(3):e0151842. doi: 10.1371/journal.pone.0151842. eCollection 2016.
  5. Hansen DT, Robida MD, Craciunescu FM, Loskutov AV, Dörner K, Rodenberry JC, Wang X, Olson TL, Patel H, Fromme P, Sykes KF. Polyclonal Antibody Production for Membrane Proteins via Genetic Immunization.
    Sci Rep. 2016 Feb 24;6:21925. doi: 10.1038/srep21925.
  6. Ayyer K, Yefanov OM, Oberthür D, Roy-Chowdhury S, Galli L, Mariani V, Basu S, Coe J, Conrad CE, Fromme R, Schaffer A, Dörner K, James D, Kupitz C, Metz M, Nelson G, Xavier PL, Beyerlein KR, Schmidt M, Sarrou I, Spence JC, Weierstall U, White TA, Yang JH, Zhao Y, Liang M, Aquila A, Hunter MS, Robinson JS, Koglin JE, Boutet S, Fromme P, Barty A, Chapman HN. Macromolecular diffractive imaging using imperfect crystals.
    Nature. 2016 Feb 11;530(7589):202-6. doi: 10.1038/nature16949.
  7. Abdallah, B.G., N.A. Zatsepin, S. Roy-Chowdhury, J. Coe, C.E. Conrad, K. Dörner, R.G. Sierra, H.P. Stevenson, F. Camacho-Alanis, T.D. Grant, G. Nelson, D. James, G. Calero, R.M. Wachter, J.C.H. Spence, U. Weierstall, P. Fromme, and A. Ros, Microfluidic sorting of protein nanocrystals by size for X-ray free-electron laser diffraction. Structural Dynamics, 2015. 2(4): p. 041719.
  8. Gong, Z., J.M. Martin-Garcia, S.M. Daskalova, F.M. Craciunescu, L. Song, K. Dörner, D.T. Hansen, J.-H. Yang, J. LaBaer, B.G. Hogue, T.S. Mor, and P. Fromme, Biophysical Characterization of a Vaccine Candidate against HIV-1: The Transmembrane and Membrane Proximal Domains of HIV-1 gp41 as a Maltose Binding Protein Fusion. PLoS ONE, 2015. 10(8): p. e0136507.
  9. Fromme, R., A. Ishchenko, M. Metz, S.R. Chowdhury, S. Basu, S. Boutet, P. Fromme, T.A. White, A. Barty, J.C.H. Spence, U. Weierstall, W. Liu, and V. Cherezov, Serial femtosecond crystallography of soluble proteins in lipidic cubic phase. IUCrJ, 2015. 2(5): p. 545-551.
  10. Lawrence, R.M., C.E. Conrad, N.A. Zatsepin, T.D. Grant, H. Liu, D. James, G. Nelson, G. Subramanian, A. Aquila, M.S. Hunter, M. Liang, S. Boutet, J. Coe, J.C.H. Spence, U. Weierstall, W. Liu, P. Fromme, V. Cherezov, and B.G. Hogue, Serial femtosecond X-ray diffraction of enveloped virus microcrystals. Structural Dynamics, 2015. 2(4): p. 041720.
  11. Kang, Y.; Zhou, X. E.; Gao, X.; He, Y.; Liu, W.; Ishchenko, A.; Barty, A.; White, T. A.; Yefanov, O.; Han, G. W.; Xu, Q.; de Waal, P. W.; Ke, J.; Tan, M. H. E.; Zhang, C.; Moeller, A.; West, G. M.; Pascal, B. D.; Van Eps, N.; Caro, L. N.; Vishnivetskiy, S. A.; Lee, R. J.; Suino-Powell, K. M.; Gu, X.; Pal, K.; Ma, J.; Zhi, X.; Boutet, S.; Williams, G. J.; Messerschmidt, M.; Gati, C.; Zatsepin, N. A.; Wang, D.; James, D.; Basu, S.; Roy-Chowdhury, S.; Conrad, C. E.; Coe, J.; Liu, H.; Lisova, S.; Kupitz, C.; Grotjohann, I.; Fromme, R.; Jiang, Y.; Tan, M.; Yang, H.; Li, J.; Wang, M.; Zheng, Z.; Li, D.; Howe, N.; Zhao, Y.; Standfuss, J.; Diederichs, K.; Dong, Y.; Potter, C. S.; Carragher, B.; Caffrey, M.; Jiang, H.; Chapman, H. N.; Spence, J. C. H.; Fromme, P.; Weierstall, U.; Ernst, O. P.; Katritch, V.; Gurevich, V. V.; Griffin, P. R.; Hubbell, W. L.; Stevens, R. C.; Cherezov, V.; Melcher, K.; Xu, H. E., Crystal structure of rhodopsin bound to arrestin by femtosecond X-ray laser. Nature 2015, advance online publication.
  12. Zook, J., G. Mo, Nicholas J. Sisco, Felicia M. Craciunescu, Debra T. Hansen, B. Baravati, Brian R. Cherry, K. Sykes, R. Wachter, Wade D. Van Horn, and P. Fromme, NMR Structure of Francisella tularensis Virulence Determinant Reveals Structural Homology to Bet v1 Allergen Proteins. Structure, 2015. 23(6): p. 1116-1122.
  13. Zhang, H., H. Unal, C. Gati, Gye W. Han, W. Liu, Nadia A. Zatsepin, D. James, D. Wang, G. Nelson, U. Weierstall, Michael R. Sawaya, Q. Xu, M. Messerschmidt, Garth J. Williams, S. Boutet, Oleksandr M. Yefanov, Thomas A. White, C. Wang, A. Ishchenko, Kalyan C. Tirupula, R. Desnoyer, J. Coe, Chelsie E. Conrad, P. Fromme, Raymond C. Stevens, V. Katritch, Sadashiva S. Karnik, and V. Cherezov, Structure of the Angiotensin Receptor Revealed by Serial Femtosecond Crystallography. Cell, 2015. 161(4): p. 833-844.
  14. Yang, J.-H., I. Sarrou, J.M. Martin-Garcia, S. Zhang, K.E. Redding, and P. Fromme, Purification and biochemical characterization of the ATP synthase from Heliobacterium modesticaldum. Protein Expression and Purification, 2015. 114(0): p. 1-8.
  15. Fenalti, G., N.A. Zatsepin, C. Betti, P. Giguere, G.W. Han, A. Ishchenko, W. Liu, K. Guillemyn, H. Zhang, D. James, D. Wang, U. Weierstall, J.C.H. Spence, S. Boutet, M. Messerschmidt, G.J. Williams, C. Gati, O.M. Yefanov, T.A. White, D. Oberthuer, M. Metz, C.H. Yoon, A. Barty, H.N. Chapman, S. Basu, J. Coe, C.E. Conrad, R. Fromme, P. Fromme, D. Tourwé, P.W. Schiller, B.L. Roth, S. Ballet, V. Katritch, R.C. Stevens, and V. Cherezov, Structural basis for bifunctional peptide recognition at human δ-opioid receptor. Nat Struct Mol Biol, 2015. 22(3): p. 265-268.
  16. Coe, J., C. Kupitz, S. Basu, C.E. Conrad, S. Roy-Chowdhury, R. Fromme, and P. Fromme, Crystallization of Photosystem II for Time-Resolved Structural Studies Using an X-ray Free Electron Laser, in Methods in Enzymology, K.S. Arun, Editor. 2015, Academic Press. p. 459-482.
  17. Chen, J., A. Kell, K. Acharya, C. Kupitz, P. Fromme, and R. Jankowiak, Critical assessment of the emission spectra of various photosystem II core complexes. Photosynthesis Research, 2015. 124(3): p. 253-265.
  18. Abdallah, B.G., S. Roy-Chowdhury, J. Coe, P. Fromme, and A. Ros, High Throughput Protein Nanocrystal Fractionation in a Microfluidic Sorter. Analytical Chemistry, 2015. 87(8): p. 4159-4167.

2014

  1. Zook, J.D., N. Sisco, G. Mo, D. Hansen, F. Craciunescu, B. Cherry, K. Sykes, W. Van Horn, and P. Fromme, High-Resolution NMR Spectroscopy Reveals Structure of Lipoprotein flpp3. Biophysical Journal, 2014. 106(2): p. 193a.
  2. Yang, J.-H., R. Fromme, P. Fromme, K. Redding, I. Sarrous, and J.E. Evans, Isolation and characterization of the F1F0 ATP synthase from Heliobacterium modesticaldum. BBA-Bioenergetics, 2014(1837): p. e22.
  3. Weierstall, U., D. James, C. Wang, T.A. White, D. Wang, W. Liu, J.C.H. Spence, R. Bruce Doak, G. Nelson, P. Fromme, R. Fromme, I. Grotjohann, C. Kupitz, N.A. Zatsepin, H. Liu, S. Basu, D. Wacker, G. Won Han, V. Katritch, S. Boutet, M. Messerschmidt, G.J. Williams, J.E. Koglin, M. Marvin Seibert, M. Klinker, C. Gati, R.L. Shoeman, A. Barty, H.N. Chapman, R.A. Kirian, K.R. Beyerlein, R.C. Stevens, D. Li, S.T.A. Shah, N. Howe, M. Caffrey, and V. Cherezov, Lipidic cubic phase injector facilitates membrane protein serial femtosecond crystallography. Nature Communications, 2014. 5: p. 3309.
  4. Tenboer, J., S. Basu, N. Zatsepin, K. Pande, D. Milathianaki, M. Frank, M. Hunter, S. Boutet, G.J. Williams, J.E. Koglin, D. Oberthuer, M. Heymann, C. Kupitz, C. Conrad, J. Coe, S. Roy-Chowdhury, U. Weierstall, D. James, D. Wang, T. Grant, A. Barty, O. Yefanov, J. Scales, C. Gati, C. Seuring, V. Srajer, R. Henning, P. Schwander, R. Fromme, A. Ourmazd, K. Moffat, J.J. Van Thor, J.C.H. Spence, P. Fromme, H.N. Chapman, and M. Schmidt, Time-resolved serial crystallography captures high-resolution intermediates of photoactive yellow protein. Science, 2014. 346(6214): p. 1242-1246.
  5. Tarakeshwar, P., J.L. Palma, G.P. Holland, P. Fromme, J.L. Yarger, and V. Mujica, Probing the Nature of Charge Transfer at Nano–Bio Interfaces: Peptides on Metal Oxide Nanoparticles. The Journal of Physical Chemistry Letters, 2014. 5(20): p. 3555-3559.
  6. Paul, R., R.E. Jinkerson, K. Buss, J. Steel, R. Mohr, W.R. Hess, M. Chen, and P. Fromme, Draft genome sequence of the filamentous cyanobacterium Leptolyngbya sp. strain Heron Island J, exhibiting chromatic acclimation. Genome announcements, 2014. 2(1): p. e01166-13.
  7. Meza-Aguilar, J.D., P. Fromme, A. Torres-Larios, G. Mendoza-Hernández, U. Hernandez-Chiñas, R.A. Arreguin-Espinosa de los Monteros, C.A. Eslava Campos, and R. Fromme, X-ray crystal structure of the passenger domain of plasmid encoded toxin (Pet), an autotransporter enterotoxin from enteroaggregative Escherichia coli (EAEC). Biochemical and biophysical research communications, 2014. 445(2): p. 439-444.
  8. McSweeney, S. and P. Fromme, Crystallography: Sources of inspiration. Nature, 2014. 505(7485): p. 620-621.
  9. Martin-Garcia, J.M., D.T. Hansen, J. Zook, A.V. Loskutov, M.D. Robida, F.M. Craciunescu, K.F. Sykes, R.M. Wachter, P. Fromme, and J.P. Allen, Purification and Biophysical Characterization of the CapA Membrane Protein FTT0807 from Francisella tularensis. Biochemistry, 2014. 53(12): p. 1958-1970.
  10. Martin, J.M., D.T. Hansen, A. Loskutov, M.D. Robida, F.M. Craciunescu, K. Sykes, R.M. Wachter, P. Fromme, and J.P. Allen, Sequence Analysis and Biophysical Characterization Reveals the Presence of a Long Disordered Region in the CapA Membrane Protein from F. Tularensis. Biophysical Journal, 2014. 106(2): p. 688a.
  11. Lee, H.-H., I. Cherni, H.Q. Yu, R. Fromme, J.D. Doran, I. Grotjohann, M. Mittman, S. Basu, A. Deb, K. Dorner, A. Aquila, A. Barty, S. Boutet, H.N. Chapman, R.B. Doak, M.S. Hunter, D. James, R.A. Kirian, C. Kupitz, R.M. Lawrence, H. Liu, K. Nass, I. Schlichting, K.E. Schmidt, M.M. Seibert, R.L. Shoeman, J.C.H. Spence, F. Stellato, U. Weierstall, G.J. Williams, C. Yoon, D. Wang, N.A. Zatsepin, B.G. Hogue, N. Matoba, P. Fromme, and T.S. Mor, Expression, purification and crystallization of CTB-MPR, a candidate mucosal vaccine component against HIV-1. IUCrJ, 2014. 1(5): p. 305-317.
  12. Kupitz, C., I. Grotjohann, C.E. Conrad, S. Roy-Chowdhury, R. Fromme, and P. Fromme, Microcrystallization techniques for serial femtosecond crystallography using photosystem II from Thermosynechococcus elongatus as a model system. Philosophical Transactions of the Royal Society B: Biological Sciences, 2014. 369(1647): p. 20130316.
  13. Kupitz, C., S. Basu, I. Grotjohann, R. Fromme, N.A. Zatsepin, K.N. Rendek, M.S. Hunter, R.L. Shoeman, T.A. White, D. Wang, D. James, J.-H. Yang, D.E. Cobb, B. Reeder, R.G. Sierra, H. Liu, A. Barty, A.L. Aquila, D. Deponte, R.A. Kirian, S. Bari, J.J. Bergkamp, K.R. Beyerlein, M.J. Bogan, C. Caleman, T.-C. Chao, C.E. Conrad, K.M. Davis, H. Fleckenstein, L. Galli, S.P. Hau-Riege, S. Kassemeyer, H. Laksmono, M. Liang, L. Lomb, S. Marchesini, A.V. Martin, M. Messerschmidt, D. Milathianaki, K. Nass, A. Ros, S. Roy-Chowdhury, K. Schmidt, M. Seibert, J. Steinbrener, F. Stellato, L. Yan, C. Yoon, T.A. Moore, A.L. Moore, Y. Pushkar, G.J. Williams, S. Boutet, R.B. Doak, U. Weierstall, M. Frank, H.N. Chapman, J.C.H. Spence, and P. Fromme, Serial time-resolved crystallography of photosystem II using a femtosecond X-ray laser. Nature, 2014. 513(7517): p. 261-265.
  14. Kupitz, C., S. Basu, I. Grotjohann, R. Fromme, D. Wang, D. James, J. Spence, U. Weierstall, and P. Fromme, Femtosecond Nanocrystallography and Characterization of Photosystem II. Acta Crystallographica Section A, 2014. 70(a1): p. C1141.
  15. Gong, Z., S.A. Kessans, L. Song, K. Dörner, H.-H. Lee, L.R. Meador, J. LaBaer, B.G. Hogue, T.S. Mor, and P. Fromme, Recombinant expression, purification, and biophysical characterization of the transmembrane and membrane proximal domains of HIV-1 gp41. Protein Science, 2014. 23(11): p. 1607-1618.
  16. Fromme, P., Leading-edge lasers. Nature, 2014. 505(7485): p. 620-621.
  17. Flory, J.D., C.R. Simmons, S. Lin, T. Johnson, A. Andreoni, J. Zook, G. Ghirlanda, Y. Liu, H. Yan, and P. Fromme, Low Temperature Assembly of Functional 3D DNA-PNA-Protein Complexes. Journal of the American Chemical Society, 2014. 136(23): p. 8283-8295.
  18. Flory, J.D., T. Johnson, C.R. Simmons, S. Lin, G. Ghirlanda, and P. Fromme, Purification and assembly of thermostable Cy5 labeled γ-PNAs into a 3D DNA nanocage. Artificial DNA: PNA & XNA, 2014. 5(3): p. 1-8.
  19. Dorner, K., J. Martin-Garcia, C. Kupitz, R. Wachter, and P. Fromme, Detection of protein nanocrystals based on the reversibility of crystallization. Acta Crystallographica Section A, 2014. 70(a1): p. C1147.
  20. Dörner, K., J.M. Garcia, C. Kupitz, R.M. Wachter, and P. Fromme, Detection of Protein Nanocrystals Based on the Reversibility of Crystallization. Biophysical Journal, 2014. 106(2): p. 458a.
  21. Deb, A., W. Johnson, D. Srinivas, L. Chen, P. Fromme, and T. Leket-Mor. Towards a Crystal Structure Of The Hiv-1 Membrane Protein, Vpu. in Protein Science. 2014. Wiley-Blackwell, Hoboken, NJ.
  22. Arnlund, D., L.C. Johansson, C. Wickstrand, A. Barty, G.J. Williams, E. Malmerberg, J. Davidsson, D. Milathianaki, D.P. DePonte, R.L. Shoeman, D. Wang, D. James, G. Katona, S. Westenhoff, T.A. White, A. Aquila, S. Bari, P. Berntsen, M. Bogan, T.B. van Driel, R.B. Doak, K.S. Kjaer, M. Frank, R. Fromme, I. Grotjohann, R. Henning, M.S. Hunter, R.A. Kirian, I. Kosheleva, C. Kupitz, M. Liang, A.V. Martin, M.M. Nielsen, M. Messerschmidt, M.M. Seibert, J. Sjohamn, F. Stellato, U. Weierstall, N.A. Zatsepin, J.C.H. Spence, P. Fromme, I. Schlichting, S. Boutet, G. Groenhof, H.N. Chapman, and R. Neutze, Visualizing a protein quake with time-resolved X-ray scattering at a free-electron laser. Nat Meth, 2014. 11(9): p. 923-926.

 

2013

 

  1. Zook, J.D., T.R. Moulgu, N. Jacobsen, G. Lin, B. Cherry, M.F. Brown, and P. Fromme, Secondary Structure and Folding of Amino Acid Transporter from Outer Chloroplast Membrane. Biophysical Journal, 2013. 104(2): p. 221a.
  2. Zook, J.D., T.R. Molugu, N.E. Jacobsen, G. Lin, J. Soll, B.R. Cherry, M.F. Brown, and P. Fromme, High-Resolution NMR Reveals Secondary Structure and Folding of Amino Acid Transporter from Outer Chloroplast Membrane. PLoS ONE, 2013. 8(10): p. e78116.
  3. Ros, A., B. Abdallah, T.-C. Chiao, C. Kupitz, and P. Fromme. Nanocrystal sorting for femtosecond nanocrystallography of proteins. in Abstracts of papers of the American Chemical Society. 2013. American Chemical Society, Washington, D.C.
  4. Rendek, K.N., R. Fromme, I. Grotjohann, and P. Fromme, Crystallization of a self-assembled three-dimensional DNA nanostructure. Acta Crystallographica Section F, 2013. 69(2): p. 141-146.
  5. Redecke, L., K. Nass, D.P. DePonte, T.A. White, D. Rehders, A. Barty, F. Stellato, M. Liang, T.R.M. Barends, S. Boutet, G.J. Williams, M. Messerschmidt, M.M. Seibert, A. Aquila, D. Arnlund, S. Bajt, T. Barth, M.J. Bogan, C. Caleman, T.-C. Chao, R.B. Doak, H. Fleckenstein, M. Frank, R. Fromme, L. Galli, I. Grotjohann, M.S. Hunter, L.C. Johansson, S. Kassemeyer, G. Katona, R.A. Kirian, R. Koopmann, C. Kupitz, L. Lomb, A.V. Martin, S. Mogk, R. Neutze, R.L. Shoeman, J. Steinbrener, N. Timneanu, D. Wang, U. Weierstall, N.A. Zatsepin, J.C.H. Spence, P. Fromme, I. Schlichting, M. Duszenko, C. Betzel, and H.N. Chapman, Natively Inhibited Trypanosoma brucei Cathepsin B Structure Determined by Using an X-ray Laser. Science, 2013. 339(6116): p. 227-230.
  6. Pieper, U., A. Schlessinger, E. Kloppmann, G.A. Chang, J.J. Chou, M.E. Dumont, B.G. Fox, P. Fromme, W.A. Hendrickson, M.G. Malkowski, D.C. Rees, D.L. Stokes, M.H.B. Stowell, M.C. Wiener, B. Rost, R.M. Stroud, R.C. Stevens, and A. Sali, Coordinating the impact of structural genomics on the human [alpha]-helical transmembrane proteome. Nature Structural Molecular Biology, 2013. 20(2): p. 135-138.
  7. Liu, W., D. Wacker, C. Gati, G.W. Han, D. James, D. Wang, G. Nelson, U. Weierstall, V. Katritch, A. Barty, N.A. Zatsepin, D. Li, M. Messerschmidt, S. Boutet, G.J. Williams, J.E. Koglin, M.M. Seibert, C. Wang, S.T.A. Shah, S. Basu, R. Fromme, C. Kupitz, K.N. Rendek, I. Grotjohann, P. Fromme, R.A. Kirian, K.R. Beyerlein, T.A. White, H.N. Chapman, M. Caffrey, J.C.H. Spence, R.C. Stevens, and V. Cherezov, Serial Femtosecond Crystallography of G Protein–Coupled Receptors. Science, 2013. 342(6165): p. 1521-1524.
  8. Kupitz, C., R. Fromme, I. Grotjohann, and P. Fromme, Structural Analysis of Photosynthetic Proteins, in Chlorophyll, Photosynthesis and Bio-inspired Energy, G.C. Ferreira, Editor. 2013, World Scientific Publishing Co.: Hakensack, NJ. p. 1-40.
  9. Johansson, L.C., D. Arnlund, G. Katona, T.A. White, A. Barty, D.P. DePonte, R.L. Shoeman, C. Wickstrand, A. Sharma, G.J. Williams, A. Aquila, M.J. Bogan, C. Caleman, J. Davidsson, R.B. Doak, M. Frank, R. Fromme, L. Galli, I. Grotjohann, M.S. Hunter, S. Kassemeyer, R.A. Kirian, C. Kupitz, M. Liang, L. Lomb, E. Malmerberg, A.V. Martin, M. Messerschmidt, K. Nass, L. Redecke, M.M. Seibert, J. Sjöhamn, J. Steinbrener, F. Stellato, D. Wang, W.Y. Wahlgren, U. Weierstall, S. Westenhoff, N.A. Zatsepin, S. Boutet, J.C.H. Spence, I. Schlichting, H.N. Chapman, P. Fromme, and R. Neutze, Structure of a photosynthetic reaction centre determined by serial femtosecond crystallography. Nature Communications, 2013. 4: p. 2911.
  10. Fromme, R., Y. Xin, P. Fromme, and R. Blankenship. Structure of the membrane protein menaquinol fumerate reductase from Chloroflexus aurantiacus at 3 angstrom. in European Biophysics Journal with Biophysics Letters. 2013. Springer, New York, NY.
  11. Flory, J.D., S. Shinde, S. Lin, Y. Liu, H. Yan, G. Ghirlanda, and P. Fromme, PNA-Peptide Assembly in a 3D DNA Nanocage at Room Temperature. Journal of the American Chemical Society, 2013. 135(18): p. 6985-6993.
  12. Abdallah, B.G., C. Kupitz, P. Fromme, and A. Ros, Crystallization of the Large Membrane Protein Complex Photosystem I in a Microfluidic Channel. ACS Nano, 2013. 7(12): p. 10534-10543.
  13. Abdallah, B.G., T.-C. Chao, C. Kupitz, P. Fromme, and A. Ros, Dielectrophoretic Sorting of Membrane Protein Nanocrystals. ACS Nano, 2013. 7(10): p. 9129-9137.

2012

  1. Aquila,A Hunter,MS, Doak,RB, Kirian,RA, Fromme,P, White,TA, Andreasson,J Arnlund,D, Saja,S, Bajt, Barends,TRM, Barthelmess,M, Bogan, MJ, Bostedt,C, Bottin,H, Bozek, JD, Caleman,C. Coppola, N, Davidsson, J, DePonte, DP, Elser,V, Epp, SW, Erk,B, Fleckenstein,H, Foucar, L, Frank,M, Fromme,R, Graafsma, H, Grotjohann,I. Gumprecht,L, Hajdu,J, Hampton,CY, Hartmann,A, Hartmann, R, Hau-Riege,S, Hauser,G, Hirsemann,H, Holl,P, Holton,JM, Hömke,A, Johansson,L, Kimmel,N, Kassemeyer,S, Krasniqi,F, Kühne,K-U, Liang,M, Lomb,L, Malmerberg,E, Marchesini,S, Martin,AV, Maia, F RNC, Messerschmidt, M, Nass,K, Reich,C, Neutze,R, Rolles, D, Rudek,B, Rudenko,A, Schlichting,I, Schmidt,C, Schmidt,KE, Schulz,J, Seibert,M, Shoeman,RL, Sierra,R, Soltau,H, Starodub,D, Stellato,F, Stern,S, Strüder,L, Timneanu,N, Ullrich,J, Wang,X, Williams,GJ, Weidenspointner,G, Weierstall,U, Wunderer,C, Barty,A, Spence,JHC, and Chapman, HN. Time-resolved protein nanocrystallography using an X-ray free-electron laser. Optics Express (2012).

  2. Barty,A, Caleman,C, Aquila,A, Timneanu,N, Lomb,L, White,TA, Andreasson,J, Arnlund,D, Bajt,S, Barends,TMD, Barthelmess,M, Bogan,MJ, Bostedt,C, Bozek,JD, Coffee,R, Coppola,N, Davidsson,J, DePonte,DP, Doak,RB, Ekeberg,T, Elser,V, Epp,SW, Erk,B, Fleckenstein,H, Foucar,L, Fromme,P, Graafsma,H, Gumprecht,L, Hajdu,J, Hampton,CY, Hartmann,R, Hartmann,A, Hauser,G, Hirsemann,H, Holl,P, Hunter,MS, Johansson,L, Kassemeyer,S, Kimmel,N, Kirian,RA, Liang,M, Maia, FRNC, Malmerberg,E, Marchesini,S, Martin,AV, Nass, K, Neutze,R, Reich,C, Rolles,D, Rudek,B, Rudenko,A, Scott,H, Schlichting,I, Schulz,J, Seibert,M, Shoeman,RL, Sierra,RG, Soltau,H, Spence,JHC, Stellato,F, Stern,S, Strüder,L, Ullrich,J, Wang,X, Weidenspointner,G, Weierstall,U, Wunderer,CB, and Chapman,HN. Self-terminating diffraction gates femtosecond X-ray nanocrystallography measurements. Nature Photonics (2012).

  3. Barty,A, Caleman,C, Aquila,A, Timneanu,N, Lomb,L, White,TA, Andreasson,J, Arnlund,D, Bajt,S, Barends,TMD, Barthelmess,M, Bogan,MJ, Bostedt,C, Bozek,JD, Coffee,R, Coppola,N, Davidsson,J, DePonte,DP, Doak,RB, Ekeberg,T, Elser,V, Epp,SW, Erk,B, Fleckenstein,H, Foucar,L, Fromme,P, Graafsma,H, Gumprecht,L, Hajdu,J, Hampton,CY, Hartmann,R, Hartmann,A, Hauser,G, Hirsemann,H, Holl,P, Hunter,MS, Johansson,L, Kassemeyer,S, Kimmel,N, Kirian,RA, Liang,M, Maia, FRNC, Malmerberg,E, Marchesini,S, Martin,AV, Nass, K, Neutze,R, Reich,C, Rolles,D, Rudek,B, Rudenko,A, Scott,H, Schlichting,I, Schulz,J, Seibert,M, Shoeman,RL, Sierra,RG, Soltau,H, Spence,JHC, Stellato,F, Stern,S, Strüder,L, Ullrich,J, Wang,X, Weidenspointner,G, Weierstall,U, Wunderer,CB, and Chapman,HN. Self-terminating diffraction gates femtosecond X-ray nanocrystallography measurements. Nature Photonics (2012).

  4. Boutet S, Lomb L, Williams GJ, Barends TR, Aquila A, Doak RB, Weierstall U, Deponte DP, Steinbrener J, Shoeman RL, Messerschmidt M, Barty A, White TA, Kassemeyer S, Kirian RA, Seibert MM, Montanez PA, Kenney C, Herbst R, Hart P, Pines J, Haller G, Gruner SM, Philipp HT, Tate MW, Hromalik M, Koerner LJ, van Bakel N, Morse J, Ghonsalves W, Arnlund D, Bogan MJ, Caleman C, Fromme R, Hampton CY, Hunter MS, Johansson L, Katona G, Kupitz C, Liang M, Martin AV, Nass K, Redecke L, Stellato F, Timneanu N, Wang D, Zatsepin NA, Schafer D, Defever J, Neutze R, Fromme P, Spence JC, Chapman HN, Schlichting I. High-Resolution Protein Structure Determination by Serial Femtosecond Crystallography.. Science (2012).

  5. Brunger AT, Adams PD, Fromme P, Fromme R, Levitt, M, Schroder GF. Improving the Accuracy of Macromolecular Structure Refinement at 7 Ångstrøm Resolution. Structure (2012).

  6. Brunger AT, Adams PD, Fromme P, Fromme R, Levitt, M, Schroder GF. Improving the Accuracy of Macromolecular Structure Refinement at 7 Ångstrøm Resolution. Structure (2012).

  7. Johansson LC, Arnlund D, White TA, Katona G, Deponte DP, Weierstall U, Doak RB, Shoeman RL, Lomb L, Malmerberg E, Davidsson J, Nass K, Liang M, Andreasson J, Aquila A, Bajt S, Barthelmess M, Barty A, Bogan MJ, Bostedt C, Bozek JD, Caleman C, Coffee R, Coppola N, Ekeberg T, Epp SW, Erk B, Fleckenstein H, Foucar L, Graafsma H, Gumprecht L, Hajdu J, Hampton CY, Hartmann R, Hartmann A, Hauser G, Hirsemann H, Holl P, Hunter MS, Kassemeyer S, Kimmel N, Kirian RA, Maia FR, Marchesini S, Martin AV, Reich C, Rolles D, Rudek B, Rudenko A, Schlichting I, Schulz J, Seibert MM, Sierra RG, Soltau H, Starodub D, Stellato F, Stern S, Struder L, Timneanu N, Ullrich J, Wahlgren WY, Wang X, Weidenspointner G, Wunderer C, Fromme P, Chapman HN, Spence JC, Neutze R. Lipidic phase membrane protein serial femtosecond crystallography.. Nature Methods (2012).

  8. Koopmann,R, Cupelli, K, Redecke,L, Nass,K, DePonte,D, White,TA, Stellato,F, Rehders,D, Liang, M, Andreasson,J, Aquila,A, Bajt,S, Barthelmess,M, Barty,A, Bogan,MJ, Bostedt,C, Boutet,S, Bozek,JD, Caleman,C, Coppola,N, Davidsson,J, Doak,RB, Ekeberg,T, Epp,SW, Erk,B, Fleckenstein,H, Foucar,L, Graafsma,H, Gumprecht,L, Hajdu,J, Hampton,CY, Hartmann,A, Hartmann,R, Hauser,G, Hirsemann,H, Holl,P, Hunter,MS, Kassemeyer,S, Kimmel,N, Kirian,RA, Lomb,L, Maia, FRNC , Martin,AV, Messerschmidt,M, Reich,C, Rolles,D, Rudek,B, Rudenko,A, Schlichting,I, Schulz,J, Seibert,M, Shoeman,RL, Sierra,RG, Soltau,H, Stern,S, Strüder,L, Timneanu, N, Ullrich,J, Wang,X, Weidenspointner,G, Weierstall,U, Williams,GJ, Wunderer,C, Fromme,P, Spence,JHC, Stehle,T, Chapman,HN, Betzel,C, Duszenko, M. In vivo protein crystallization opens new routes in structural biology. Nat Methods (2012).

  9. Redecke L, Nass K, Deponte DP, White TA, Rehders D, Barty A, Stellato F, Liang M, Barends TR, Boutet S, Williams GJ, Messerschmidt M, Seibert MM, Aquila A, Arnlund D, Bajt S, Barth T, Bogan MJ, Caleman C, Chao TC, Doak RB, Fleckenstein H, Frank M, Fromme R, Galli L, Grotjohann I, Hunter MS, Johansson LC, Kassemeyer S, Katona G, Kirian RA, Koopmann R, Kupitz C, Lomb L, Martin AV, Mogk S, Neutze R, Shoeman RL, Steinbrener J, Timneanu N, Wang D, Weierstall U, Zatsepin NA, Spence JC, Fromme P, Schlichting I, Duszenko M, Betzel C, Chapman HN. Natively Inhibited Trypanosoma brucei Cathepsin B Structure Determined by Using an X-ray Laser.. Science (2012).

  10. Yadavalli V, Jolley CC, Malleda C, Thangaraj B, Fromme P, Subramanyam R. Alteration of proteins and pigments influence the function of photosystem I under iron deficiency from Chlamydomonas reinhardtii.. PLoS One (2012).


2011

  1. Chapman HN, Fromme P, Barty A, White T, Kirian R, Aquila A, Hunter M, Schulz J, DePonte D, Weierstall U, Doak R, Maia F, Martin A, Schlichting I, Lomb L, Coppola N, Shoeman R, Epp S, Hartmann R, Rolles D, Rudenko A, Foucar L, Kimmel N, Weidenspointner G, Holl P, Liang M, Barthelmess M, Caleman C, Boutet S, Bogan M, Krzywinski J, Bostedt C, Bajt S, Gumprecht L, Rudek B, Erk B, Schmidt C, Hömke A, Reich C, Pietschner D, Strüder l, Hauser G, Gorke H, Ullrich J, Herrmann S, Schaller G, Schopper F, Soltau H, Kühnel K-U, Messerschmidt M, Bozek J, Hau-Riege S, Frank M, Hampton C, Sierra R, Starodub D, Williams G, Hajdu J, Timneanu N, Seibert M, Andreasson J, Rocker A, Jönsson O, Stern S, Nass K, Andritschke R, Schröter C-D, Krasniqi F, Bott M, Schmidt K, Wang X, Grotjohann I, Holton J, Marchesini S, Schorb S, Rupp D, Adolph M, Gorkhover T, Svenda M, Hirsemann H, Potdevin G, Graafsma H, Nilsson B, Spence J. Femtosecond X-ray protein nanocrystallography. Nature (2011).

  2. Chapman HN, Fromme P, Barty A, White T, Kirian R, Aquila A, Hunter M, Schulz J, DePonte D, Weierstall U, Doak R, Maia F, Martin A, Schlichting I, Lomb L, Coppola N, Shoeman R, Epp S, Hartmann R, Rolles D, Rudenko A, Foucar L, Kimmel N, Weidenspointner G, Holl P, Liang M, Barthelmess M, Caleman C, Boutet S, Bogan M, Krzywinski J, Bostedt C, Bajt S, Gumprecht L, Rudek B, Erk B, Schmidt C, Hömke A, Reich C, Pietschner D, Strüder l, Hauser G, Gorke H, Ullrich J, Herrmann S, Schaller G, Schopper F, Soltau H, Kühnel K-U, Messerschmidt M, Bozek J, Hau-Riege S, Frank M, Hampton C, Sierra R, Starodub D, Williams G, Hajdu J, Timneanu N, Seibert M, Andreasson J, Rocker A, Jönsson O, Stern S, Nass K, Andritschke R, Schröter C-D, Krasniqi F, Bott M, Schmidt K, Wang X, Grotjohann I, Holton J, Marchesini S, Schorb S, Rupp D, Adolph M, Gorkhover T, Svenda M, Hirsemann H, Potdevin G, Graafsma H, Nilsson B, Spence JHC. Femtosecond X-ray protein nanocrystallography. Nature (2011).

  3. Chauhan D, Folea IM, Jolley CC, Kouril R, Lubner CE, Lin S, Kolber D, Wolfe-Simon F, Golbeck JH, Boekema EJ, Fromme P. A Novel Photosynthetic Strategy for Adaptation to Low-Iron Aquatic Environments.. Biochemistry (2011).

  4. Fromme P, Spence JC.. Femtosecond nanocrystallography using X-ray lasers for membrane protein structure determination. Curr Opin Struct Biol (2011).

  5. Hunter M. S., Kirian, R. Shapiro, D. Deponte, D. Marchesini, S. Wang, X Starodub, D.,Weierstall . U., Doak R.B.,, Spence, J.C.H Fromme, P.. X-ray diffraction from protein nanocrystals. Biophys J. (2011).

  6. Hunter M. S., Kirian, R. Shapiro, D. Deponte, D. Marchesini, S. Wang, X Starodub, D.,Weierstall . U., Doak R.B.Spence, J.C.H Fromme, P.. X-ray diffraction from protein nanocrystals. Biophys J. (2011).

  7. Hunter MS, Fromme P.. Toward structure determination using membrane-protein nanocrystals and microcrystals. Methods (2011).

  8. Kirian RA, White TA, Holton JM, Chapman HN, Fromme P, Barty A, Lomb L, Aquila A, Maia FR, Martin AV, Fromme R, Wang X, Hunter MS, Schmidt KE, Spence JC. Acta Crystallogr A. Structure-factor analysis of femtosecond microdiffraction patterns from protein nanocrystals (2011).

  9. Kirian RA, White TA, Holton JM, Chapman HN, Fromme P, Barty A, Lomb L, Aquila A, Maia FR, Martin AV, Fromme R, Wang X, Hunter MS, Schmidt KE, Spence JHC. Structure-factor analysis of femtosecond microdiffraction patterns from protein nanocrystals.. Acta Crystallogr A (2011).

  10. Lomb, L, Barends,TRM, Kassemeyer,S, Aquila,A, Epp,SW, Erk,B, Foucar,L, Hartmann,R, Rudek,B, Rolles,D, Rudenko,A, Shoeman,RL, Andreasson,J, Bajt,S, Barthelmess,M, Barty,A, Bogan,MJ, Bostedt,C, Bozek,DJ, Caleman,C, Coffee,R, Coppola,N, DePonte,DP, Doak,RB, Ekeberg,T, Fleckenstein,H, Fromme,P, Gebhardt,M, Graafsma,H, Gumprecht,L, Hampton,CY, Hartmann,A, Hauser,G, Hirsemann,H, Holl,P, Holton,JM, Hunter,MS, Kabsch,W, Kimmel,N, Kirian,RA, Liang,M, Maia, F R N C , Meinhart,A, Marchesini,S, Martin, AV, Nass,K, Reich,C, Schulz,J, Seibert,M, Sierra,R, Soltau,H. Spence,JHC, Steinbrener,J, Stellato,F, Stern,S, Timneanu,N, Wang,X, Weidenspointner,G, Weierstall,U, White,TA, Wunderer,C, Chapman,HN, Ullrich,J, Strüder,L, and Schlichting,I (. Physical Review B. Radiation damage in protein serial femtosecond crystallography using an x-ray free-electron laser (2011).

  11. Ni Da Q, Zook J, Klewer DA, Nieman RA, Soll J, Fromme P. Isolation, folding and structural investigations of the amino acid transporter OEP16.. Protein Expr Purif (2011).

  12. Seibert MM, Ekeber T, Maia FRNC, Svenda M, Andreasson J, Jönsson O, Odic D, Iwan B Rocker A, Westphal D, Chapman HN, DePonte DP, Barty A, Schulz J, Gumprecht L, Coppola N, Aquila A, Liang M, White T, Martin A, Stern S, Abergel C, Tichanné-Seltzer V, Claverie J-M, Bozek JD, Bostedt C, Boutet S, Miahnahri AA, Messerscyhmidt M, Krzywinski J, Williams G, Hodgson KO, Bogan MJ, Hampton C, Sierra R, Starodub D, Andersson I, Bajt S, Barthelmess M , Spence JCH , Fromme P , Weierstall U , Kirian R , Hunter M, Doak B , Marchesini S, Hau-Riege S, Frank M, Shoeman RL, Lomb L, Epp S, Hartmann R, Rolles D, Rudenko A, Schmidt C, Foucar L, Kimmel N , Holl P, Rudek B, Erk B, Hömke A, Reich C, Pietschner D, Weiden-spointner G, Strüder L, Hauser G, Gorke H, Ullrich J, Schlichting I, Herrmann S, Schaller G, Schopper F, Soltau H, Kühnel K-U, Andritschke R, Schröter C-D, Krasniqi F, Bott M, Schorb S, Rupp D, Adolph M, Gorkhover T, Hirsemann H, Potdevin G, Graafsma H, Nilsson B, Hajdu J. Single Mimivirus particles imaged on-the-fly with an X-ray laser. Nature (2011).

  13. Seibert MM, Ekeber T, Maia FRNC, Svenda M, Andreasson J, Jönsson O, Odic D, Iwan B Rocker A, Westphal D, Chapman HN, DePonte DP, Barty A, Schulz J, Gumprecht L, Coppola N, Aquila A, Liang M, White T, Martin A, Stern S, Abergel C, Tichanné-Seltzer V, Claverie J-M, Bozek JD, Bostedt C, Boutet S, Miahnahri AA, Messerscyhmidt M, Krzywinski J, Williams G, Hodgson KO, Bogan MJ, Hampton C, Sierra R, Starodub D, Andersson I, Bajt S, Barthelmess M , Spence JCH , Fromme P , Weierstall U , Kirian R , Hunter M, Doak B , Marchesini S, Hau-Riege S, Frank M, Shoeman RL, Lomb L, Epp S, Hartmann R, Rolles D, Rudenko A, Schmidt C, Foucar L, Kimmel N , Holl P, Rudek B, Erk B, Hömke A, Reich C, Pietschner D, Weiden-spointner G, Strüder L, Hauser G, Gorke H, Ullrich J, Schlichting I, Herrmann S, Schaller G, Schopper F, Soltau H, Kühnel K-U, Andritschke R, Schröter C-D, Krasniqi F, Bott M, Schorb S, Rupp D, Adolph M, Gorkhover T, Hirsemann H, Potdevin G, Graafsma H, Nilsson B, Hajdu J. Single Mimivirus particles imaged on-the-fly with an X-ray laser. Nature 470, 78-81 (2011).

  14. Thangaraj,B. , Jolley, CC, Sarrou, I, Bultema,JB, Greyslak,J. , Whitelegge, JP., Lin,S. Kouril, R., Subramanyam,R. Boekema, EJ and Fromme, P.. Efficient light harvesting in a dark, hot, acidic environment: The structure and function of PSI-LHCI from Galdieria sulphuraria. Biophys J. (2011).


2010

  1. Chauhan D, Folea IM, Jolley CC, Kouril R, Lubner CE, Lin S, Kolber D, Wolfe-Simon F, Golbeck JH, Boekema EJ, Fromme P. A Novel Photosynthetic Strategy for Adaptation to Low-Iron Aquatic Environments. Biochemistry (2010).

  2. Lawrence RM, Varco-Merth B, Bley CJ, Chen JJ, Fromme P. Recombinant production and purification of the subunit c of chloroplast ATP synthase.. Protein Expr Purif (2010).

  3. Subramanyam, R., Jolley, C. Thangaraj, B. Nellaepalli, S. Webber, A.N. and Fromme, P.. Structural and functional changes of PSI-LHCI supercomplexes of Chlamydomonas reinhardtii cells grown under high salt conditions. Planta (2010).

  4. Thangaraj B, Ryan CM, Souda P, Krause K, Faull KF, Weber AP, Fromme P, Whitelegge JP. Data-directed top-down Fourier-transform mass spectrometry of a large integral membrane protein complex: photosystem II from Galdieria sulphuraria. Proteomics (2010).


2009

  1. Vanselow,C. Weber, A.P.M., Krause, K. and Fromme, P.. Genetic Analysis of the Photosystem I Subunits from the red alga, Galdieria sulphuraria. Biochm. Biophys. Acta (2009).

  2. Xin Y, Lu YK, Fromme R, Fromme P, Blankenship RE. Purification, characterization and crystallization of menaquinol:fumarate oxidoreductase from the green filamentous photosynthetic bacterium Chloroflexus aurantiacus.. Biochim Biophys Acta (2009).

  3. Book chapter: Gabrielsen,M Gardiner, AT, Fromme,P. and Cogdell, RJ. How to approach the problem of crystallising membrane proteins.. Membrane Protein Crystallization. Academic Press, Elsevier (2009).