{"id":323,"date":"2023-10-30T16:50:50","date_gmt":"2023-10-30T16:50:50","guid":{"rendered":"https:\/\/biodesign.asu.edu\/mechanisms-of-evolution\/?page_id=323"},"modified":"2026-10-15T19:10:48","modified_gmt":"2026-10-15T19:10:48","slug":"publications","status":"publish","type":"page","link":"https:\/\/biodesign.asu.edu\/mechanisms-of-evolution\/publications\/","title":{"rendered":"Publications"},"content":{"rendered":"\n<div class=\"wp-block-unityblocks-hero\"><div class=\"uds-hero uds-hero-md\"><div class=\"hero-overlay\"><\/div><img decoding=\"async\" class=\"hero\" src=\"https:\/\/biodesign.asu.edu\/mechanisms-of-evolution\/wp-content\/uploads\/sites\/16\/2022\/02\/mechanisms-of-evolution_banner-1920.jpg\" alt=\"\" style=\"width:100%\"\/><h1><span class=\"highlight-gold\">Center for Mechanisms of Evolution<\/span><\/h1><\/div><\/div>\n\n\n<div class=\"wp-bootstrap-blocks-container container mb-0\">\n\t\n<div class=\"wp-bootstrap-blocks-row row mt-4 mb-5\">\n\t\n\n<div 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for=\"sf-input-9a76d0ab15e7861ebcea09c48429c10f\">Proposal<\/label><\/li><li class=\"sf-level-0 sf-item-20\" data-sf-count=\"2\" data-sf-depth=\"0\"><input  class=\"sf-input-checkbox\" type=\"checkbox\" value=\"research-article\" name=\"_sft_publication_type[]\" id=\"sf-input-97fe9c3a9a87d1489b1d302e7dbc5053\"><label class=\"sf-label-checkbox\" for=\"sf-input-97fe9c3a9a87d1489b1d302e7dbc5053\">Research article<\/label><\/li><li class=\"sf-level-0 sf-item-21\" data-sf-count=\"1\" data-sf-depth=\"0\"><input  class=\"sf-input-checkbox\" type=\"checkbox\" value=\"review-article\" name=\"_sft_publication_type[]\" id=\"sf-input-f3445a64e5eb96062658d071986e5902\"><label class=\"sf-label-checkbox\" for=\"sf-input-f3445a64e5eb96062658d071986e5902\">Review article<\/label><\/li><li class=\"sf-level-0 sf-item-19\" data-sf-count=\"0\" data-sf-depth=\"0\"><input  class=\"sf-input-checkbox\" type=\"checkbox\" value=\"thesis-dissertation\" name=\"_sft_publication_type[]\" id=\"sf-input-b5bb7897c1a73758d2935813c2df609e\"><label class=\"sf-label-checkbox\" for=\"sf-input-b5bb7897c1a73758d2935813c2df609e\">Thesis\/Dissertation<\/label><\/li>\t\t<\/ul>\n\t\t<\/li><\/ul><\/form>\n<\/div>\n\n\n<div id=\"publication-block_e2d76da10052239e754497947735a989\" class=\"publication-list row position-relative mt-10\">\n\t<div class=\"col-12 mt-2 mb-4\">\n\t\t\t<\/div>\n\t\n\t\t\t\t\t\t\t<div class=\"col-12\">\n\n\t\t\t\t\t\t\t\t\t\t<h3>2023<\/h3>\t\t\t\t\t\t<div class=\"\" id=\"publication-block_e2d76da10052239e754497947735a989-318\">\n\t\t\t\t\t\t\t<div class=\"d-inline-block align-top mb-2\">\n\t\t\t\t\t\t\t\t<div class=\"publication-citation\">\n\t\t\t\t\t\t\t\t\t<p><span style=\"font-weight: 400\">Chung, C., Verheijen, B. M., Zhang, X., Huang, B., Coakley, A., McGann, E., Wade, E., Dinep-Schneider, O., LaGosh, J., Anagnostou, M.-E., Simpson, S., Thomas, K., Ernst, M., Rattray, A., Lynch, M., Kashlev, M., Benayoun, B. A., Li, Z., Strathern, J., \u2026 Vermulst, M. (2023). The fidelity of transcription in human cells. <\/span><i><span style=\"font-weight: 400\">Proceedings of the National Academy of Sciences<\/span><\/i><span style=\"font-weight: 400\">, 120(5).<\/span><\/p>\n\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tDOI: <a class=\"align-top mb-2\" target=\"_blank\" href=\"https:\/\/doi.org\/10.1073\/pnas.2210038120\">10.1073\/pnas.2210038120<\/a>.\n\n\t\t\t\t\t\t\t\t\t\t\n\t\t\t\t\t\t\t\t\t\n\n\t\t\t\t\t\t\t\t\t<p>\n\t\t\t\t\t\t\t\t\t\t<i>Research article<\/i>. \t\t\t\t\t\t\t\t\t<\/p>\n\t\t\t\t\t\t\t\t<\/div>\n\n\n\t\t\t\t\t\t\t<\/div>\n\n\t\t\t\t\t\t<\/div><hr><h3 class=\"mt-6\">2022<\/h3>\t\t\t\t\t\t<div class=\"\" id=\"publication-block_e2d76da10052239e754497947735a989-319\">\n\t\t\t\t\t\t\t<div class=\"d-inline-block align-top mb-2\">\n\t\t\t\t\t\t\t\t<div class=\"publication-citation\">\n\t\t\t\t\t\t\t\t\t<p><span style=\"font-weight: 400\">Kucukyildirim, S., Ozdemirel, H. O., &amp; Lynch, M. (2022). Similar mutation rates but different mutation spectra in moderate and extremely halophilic archaea. <\/span><i><span style=\"font-weight: 400\">G3 Genes|Genomes|Genetics<\/span><\/i><span style=\"font-weight: 400\">, <\/span><i><span style=\"font-weight: 400\">13<\/span><\/i><span style=\"font-weight: 400\">(3).<\/span><\/p>\n\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tDOI: <a class=\"align-top mb-2\" target=\"_blank\" href=\"https:\/\/doi.org\/10.1093\/g3journal\/jkac303\">10.1093\/g3journal\/jkac303<\/a>.\n\n\t\t\t\t\t\t\t\t\t\t\n\t\t\t\t\t\t\t\t\t\n\n\t\t\t\t\t\t\t\t\t<p>\n\t\t\t\t\t\t\t\t\t\t<i>Journal article<\/i>. \t\t\t\t\t\t\t\t\t<\/p>\n\t\t\t\t\t\t\t\t<\/div>\n\n\n\t\t\t\t\t\t\t<\/div>\n\n\t\t\t\t\t\t<\/div>\t\t\t\t\t\t<div class=\"\" id=\"publication-block_e2d76da10052239e754497947735a989-320\">\n\t\t\t\t\t\t\t<div class=\"d-inline-block align-top mb-2\">\n\t\t\t\t\t\t\t\t<div class=\"publication-citation\">\n\t\t\t\t\t\t\t\t\t<p><span style=\"font-weight: 400\">Lynch, M., Schavemaker, P. E., Licknack, T. J., Hao, Y., &amp; Pezzano, A. (2022). Evolutionary Bioenergetics of ciliates. <\/span><i><span style=\"font-weight: 400\">Journal of Eukaryotic Microbiology<\/span><\/i><span style=\"font-weight: 400\">, <\/span><i><span style=\"font-weight: 400\">69<\/span><\/i><span style=\"font-weight: 400\">(5). <\/span><\/p>\n\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tDOI: <a class=\"align-top mb-2\" target=\"_blank\" href=\"https:\/\/doi.org\/10.1111\/jeu.12934\">10.1111\/jeu.12934<\/a>.\n\n\t\t\t\t\t\t\t\t\t\t\n\t\t\t\t\t\t\t\t\t\n\n\t\t\t\t\t\t\t\t\t<p>\n\t\t\t\t\t\t\t\t\t\t<i>Review article<\/i>. \t\t\t\t\t\t\t\t\t<\/p>\n\t\t\t\t\t\t\t\t<\/div>\n\n\n\t\t\t\t\t\t\t<\/div>\n\n\t\t\t\t\t\t<\/div>\t\t\t\t\t\t<div class=\"\" id=\"publication-block_e2d76da10052239e754497947735a989-321\">\n\t\t\t\t\t\t\t<div class=\"d-inline-block align-top mb-2\">\n\t\t\t\t\t\t\t\t<div class=\"publication-citation\">\n\t\t\t\t\t\t\t\t\t<p><span style=\"font-weight: 400\">Lynch, M., Trickovic, B., &amp; Kempes, C. P. (2022). Evolutionary scaling of maximum growth rate with organism size. <\/span><i><span style=\"font-weight: 400\">Scientific Reports<\/span><\/i><span style=\"font-weight: 400\">, <\/span><i><span style=\"font-weight: 400\">12<\/span><\/i><span style=\"font-weight: 400\">(1).<\/span><\/p>\n\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tDOI: <a class=\"align-top mb-2\" target=\"_blank\" href=\"https:\/\/doi.org\/10.1038\/s41598-022-23626-7\">10.1038\/s41598-022-23626-7<\/a>.\n\n\t\t\t\t\t\t\t\t\t\t\n\t\t\t\t\t\t\t\t\t\n\n\t\t\t\t\t\t\t\t\t<p>\n\t\t\t\t\t\t\t\t\t\t<i>Journal article<\/i>. \t\t\t\t\t\t\t\t\t<\/p>\n\t\t\t\t\t\t\t\t<\/div>\n\n\n\t\t\t\t\t\t\t<\/div>\n\n\t\t\t\t\t\t<\/div>\t\t\t\t\t\t<div class=\"\" id=\"publication-block_e2d76da10052239e754497947735a989-322\">\n\t\t\t\t\t\t\t<div class=\"d-inline-block align-top mb-2\">\n\t\t\t\t\t\t\t\t<div class=\"publication-citation\">\n\t\t\t\t\t\t\t\t\t<p><span style=\"font-weight: 400\">Schavemaker, P. E., &amp; Lynch, M. (2022). Flagellar energy costs across the Tree of Life. <\/span><i><span style=\"font-weight: 400\">eLife<\/span><\/i><span style=\"font-weight: 400\">, <\/span><i><span style=\"font-weight: 400\">11<\/span><\/i><span style=\"font-weight: 400\">.<\/span><\/p>\n\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tDOI: <a class=\"align-top mb-2\" target=\"_blank\" href=\"https:\/\/doi.org\/10.7554\/eLife.77266\">10.7554\/eLife.77266<\/a>.\n\n\t\t\t\t\t\t\t\t\t\t\n\t\t\t\t\t\t\t\t\t\n\n\t\t\t\t\t\t\t\t\t<p>\n\t\t\t\t\t\t\t\t\t\t<i>Research article<\/i>. \t\t\t\t\t\t\t\t\t<\/p>\n\t\t\t\t\t\t\t\t<\/div>\n\n\n\t\t\t\t\t\t\t<\/div>\n\n\t\t\t\t\t\t<\/div>\t\t\t\t\t<hr>\n\t\t\t\t<\/div>\n\t\t\t\t\n\t\t<div class=\"col-12 position-absolute\" style=\"top:-35px;\">\n\t\t\t\t\t\t\t<h4>Showing 5 Results\n\t\t\t\t\t\t\t\t\t<\/h4>\n\t\t\t\t\t<\/div>\n\t\n\n\n\n<\/div>\n\n\t<\/div>\n\n<\/div>\n\n<\/div>\n\n\n<section class=\"uds-section media-file inner-bg-none text-white gl-gray-7\" style=\"background: url(https:\/\/biodesign.asu.edu\/mechanisms-of-evolution\/wp-content\/uploads\/sites\/16\/2022\/02\/Mechanisms-of-Evolution.jpg) center \/ cover no-repeat;\" ><div class=\"acf-innerblocks-container\">\n<div class=\"wp-bootstrap-blocks-container container mb-0\">\n\t\n\n<div class=\"wp-block-group is-layout-flow wp-block-group-is-layout-flow\"><div class=\"wp-bootstrap-blocks-container container mb-0 mt-5 mb-6\">\n\t\n<div class=\"wp-bootstrap-blocks-row row justify-content-between\">\n\t\n\n<div class=\"col-12 col-md-8\">\n\t\t\t\n\n<h2 class=\"wp-block-heading\">Support the Biodesign Center for Mechanisms of Evolution<\/h2>\n\n\n\n<p class=\"lead text-white wp-block-paragraph\">Uncovering the mechanisms of evolution at the gene, genomic, cellular and phenotypic levels, with attention to the roles of mutation, random genetic drift and recombination.<\/p>\n\n\t<\/div>\n\n\n\n<div class=\"col-12 col-md-4 d-flex align-items-center justify-content-lg-end\">\n\t\t\t\n\n\t<div class=\"uds-button \">\n\n\t\t\t\n\t\t\t<a href=\"https:\/\/www.asufoundation.org\/colleges-and-programs\/programs-and-centers\/biodesign-institute\/biodesign-center-for-mechanisms-of-evolution-CA110224.html\" class=\"btn btn-gold \" data-ga=\"Support\" data-ga-name=\"onclick\" data-ga-event=\"link\" data-ga-action=\"click\" data-ga-type=\"external link\" data-ga-region=\"main content\" data-ga-section=\"button\" data-component=\"button\"    >Support <\/a>\n\t\n\t\t<\/div>\n\n\t<\/div>\n\n<\/div>\n\n<\/div>\n<\/div>\n\n<\/div>\n\n<\/div><\/section>","protected":false},"excerpt":{"rendered":"","protected":false},"author":9,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":{"_acf_changed":false,"footnotes":""},"class_list":["post-323","page","type-page","status-publish","hentry"],"uds_featured_image":null,"acf":[],"yoast_head":"<!-- This site is optimized with the Yoast SEO plugin v28.7 - 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