Publications
2019
-
miRNA activity contributes to accurate RNA splicing in C. elegans intestine and body muscle tissues. BioRxiv. 2019 January;
-
ALG-1 Influences Accurate mRNA Splicing Patterns in the Caenorhabditis elegans Intestine and Body Muscle Tissues by Modulating Splicing Factor Activities. Genetics. 2019 Jul;212(3):931-951. doi: 10.1534/genetics.119.302223. Epub 2019 May 9. PubMed PMID: 31073019; PubMed Central PMCID: PMC6614907.
-
miRNA Profiling for Early Detection and Treatment of Duchenne Muscular Dystrophy. Int J Mol Sci. 2019 Sep 19;20(18). doi: 10.3390/ijms20184638. Review. PubMed PMID: 31546754; PubMed Central PMCID: PMC6769970.
-
The C. elegans 3' UTRome v2 resource for studying mRNA cleavage and polyadenylation, 3'-UTR biology, and miRNA targeting. Genome Res. 2019 Nov 19;. doi: 10.1101/gr.254839.119. [Epub ahead of print] PubMed PMID: 31744903.
2017
-
Alternative Polyadenylation Directs Tissue-Specific miRNA Targeting in Caenorhabditis elegans Somatic Tissues. Genetics. 2017 Jun;206(2):757-774. doi: 10.1534/genetics.116.196774. Epub 2017 Mar 27. PubMed PMID: 28348061; PubMed Central PMCID: PMC5499184.
-
Walter JM, Le HH, Linse A, Godlove VA, Nguyen TD, Kotagama K, Lynch A, Rawls A and Mangone M (2017) Evolutionary patterns of metazoan microRNAs reveal targeting principles in the let-7 and miR-10 families Genome Res. (2017) 27: 53-63
2016
-
Potential Diagnostic and Prognostic Biomarkers of Epigenetic Drift within the Cardiovascular Compartment. Biomed Res Int. 2016;2016:2465763. doi: 10.1155/2016/2465763. Epub 2016 Jan 28. Review. PubMed PMID: 26942189; PubMed Central PMCID: PMC4749768.
-
Differential expression of conserved and novel microRNAs during tail regeneration in the lizard Anolis carolinensis. BMC Genomics. 2016 May 5;17:339. doi: 10.1186/s12864-016-2640-3. PubMed PMID: 27150582; PubMed Central PMCID: PMC4858913.
-
Evolutionary patterns of metazoan microRNAs reveal targeting principles in the let-7 and miR-10 families. Genome Res. 2017 Jan;27(1):53-63. doi: 10.1101/gr.209361.116. Epub 2016 Dec 7. PubMed PMID: 27927717; PubMed Central PMCID: PMC5204344.
2015
-
Comparative RNA-Seq analysis reveals pervasive tissue-specific alternative polyadenylation in Caenorhabditis elegans intestine and muscles. BMC Biol. 2015 Jan 20;13:4. doi: 10.1186/s12915-015-0116-6. PubMed PMID: 25601023; PubMed Central PMCID: PMC4343181.
-
Detection of miRNA Targets in High-throughput Using the 3'LIFE Assay. J Vis Exp. 2015 May 25;(99):e52647. doi: 10.3791/52647. PubMed PMID: 26066857; PubMed Central PMCID: PMC4542967.
-
miRNAs as Biomarkers in Chronic Myelogenous Leukemia. Drug Dev Res. 2015 Sep;76(6):278-85. doi: 10.1002/ddr.21266. Epub 2015 Aug 18. Review. PubMed PMID: 26284455; PubMed Central PMCID: PMC4758911.
-
A human 3'UTR clone collection to study post-transcriptional gene regulation. BMC Genomics. 2015 Dec 9;16:1036. doi: 10.1186/s12864-015-2238-1. PubMed PMID: 26645212; PubMed Central PMCID: PMC4673713.
2014
-
3'LIFE: a functional assay to detect miRNA targets in high-throughput. Nucleic Acids Res. 2014;42(17):e132. doi: 10.1093/nar/gku626. Epub 2014 Jul 29. PubMed PMID: 25074381; PubMed Central PMCID: PMC4176154.